getSharedInteraction {SLGI} | R Documentation |
The number of common synthetic genetic interacting partners between two genes.
getSharedInteraction(iMat, mode="query")
iMat |
Adjacency matrix reporting genetic Interactions. Each entry has value 0 or 1, representing positive or negative interaction of corresponding pairs of row and column, respectively. |
mode |
Character vector of value "query" or "target" |
A numeric vector of the number of common genetic interactions between a pair of query or target genes.
N. LeMeur
congruence
intM <- matrix(c(0,1,0,0,1,1,1,0,1,0,0,1,1,0,1,0), nrow=4, ncol=4, dimnames=list(c("p1","p2","p3","p4"), c("p1","p3","p5","p7"))) sharedInt <- getSharedInteraction(intM)