domainDist {SLGI}R Documentation

Finds the number of gene sets for each shared domain

Description

domainDist takes a list of shared domains, and compute for each distinct domain how many gene sets share it.

Usage

domainDist(domainL)

Arguments

domainL Each element of the list is a vector of functional domains.

Details

For each domain that appears in the domain list, domainDist counts the number of elements that have this domain.

Value

Returns a frequency table with descending order.

Author(s)

Z. Jiang

See Also

getSharedDomains, sharedBy

Examples

data(AtongFnDomain)
domainDist(AtongFnDomain$SharedPfam[1:20])

[Package SLGI version 1.2.0 Index]