sharedBy {SLGI} | R Documentation |
sharedBy
finds whether the given domain is in each of the
elements of the domain list.
sharedBy(domainL)
domainL |
is a list, each element of the list is a vector of domains. |
sharedBy
first remove all the elements with length 0 or have
value 'NA'. Then apply the reverseSplit on the remaining list.
A list with each element represent a domain, and the values of the element are the pairs that share this domain.
Z. Jiang
reverseSplit
, domainDist
, getSharedDomains
## Load PFAM and SMART domains shared between Tong's Synthetic lethal data data(AtongFnDomain) ## Find pair that share identical domain sharedBy(AtongFnDomain$SharedPfam[1:20])