SD {affycomp} | R Documentation |
These functions create assessments, figures, and tables for expression standard errors
affycomp.figure7(l,main="Figure 7") affycomp.compfig7(l,method.names=as.character(1:length(l)), main="Figure 7") tableSD(l,method.names=NULL)
l |
a list of lists with the necessary components to create the Figure. See details. |
method.names |
a character vector with the names of the expression measures methodologies being compared. |
main |
title of the Figure. |
This uses the dilution data. The exprsets need to have standard error
estimates in the assayDataElement(exprset,"se.exprs")
. Read the
vignette for more details. The functions work similarly to those assessing
expression measures.
All these files need the result of assessSD
Depends on the call.
Rafael A. Irizarry
data(rma.sd.assessment) ##this was produced with affycomp.assess data(lw.sd.assessment) ##this one too affycomp.compfig7(list(rma.sd.assessment,lw.sd.assessment)) affycomp.figure7(rma.sd.assessment)