AffyProbesMatch-class {altcdfenvs}R Documentation

Class "AffyProbesMatch"

Description

Store the results of a call to matchAffyProbes.

Objects from the Class

Objects can be created by calls of the form new("AffyProbesMatch", ...).

An object will store the result of matching probe sequences against target sequences.

Slots

pm:
Object of class "list": each element is vector of index values
mm:
Object of class "list": each element is vector of index values
labels:
Object of class "character"
chip_type:
Object of class "character" and of length 1.
probes:
Object of class "ANY": the probetable object used to perform the matches.

Methods

combine
signature(x = "AffyProbesMatch", y = "AffyProbesMatch"): combine two instances. This is can be useful when splitting the list of target sequences to parallelized the job.
show
signature(x = "AffyProbesMatch"):Show the instance.
toHypergraph
signature(object = "AffyProbesMatch"): build an Hypergraph from the matches.

Examples

showClass("AffyProbesMatch")

[Package altcdfenvs version 2.4.0 Index]