attributeSummary | Gives a summary of the attributes groups and categories |
exportFASTA | Exports getSequence results to FASTA format |
filterOptions | Displays the filter options |
filterSummary | Gives a summary of the filters groups and categories |
filterType | Displays the filter type |
getAffyArrays | Displays affy identifiers of Affymetrix chips supported by the Ensembl package |
getBM | Retrieves information from the BioMart database |
getGene | Retrieves gene annotation information given a vector of identifiers |
getGO | Retrieves GO information |
getHomolog | Get homologs |
getLDS | Retrieves information from two linked datasets |
getSequence | Retrieves sequences |
getSNP | Retrieves SNP's between a given chromosome start and end position |
listAttributes | lists the attributes available in the selected dataset |
listDatasets | lists the datasets available in the selected BioMart database |
listFilters | lists the filters available in the selected dataset |
listMarts | lists the avilable BioMart databases |
Mart-class | Class Mart |
martDisconnect | Disconnects from BioMarts |
parseAttributes | parse attributes |
parseFilters | parse filters |
show,Mart-method | Class Mart |
useDataset | Select a dataset to use and updates Mart object |
useMart | Connects to the selected BioMart database and dataset |