getSNP {biomaRt} | R Documentation |
Retrieves SNP's given a chromosome name, a start and end position
getSNP( chromosome, start, end, mart)
chromosome |
Chromosome name |
start |
Start position on given chromosome |
end |
End position on given chromosome |
mart |
object of class Mart created using the useMart function |
Steffen Durinck
if(interactive()){ mart <- useMart("snp",dataset="hsapiens_snp") snp = getSNP(chromosome = 8, start = 148350, end = 148612, mart = mart) show(snp) }