deDGEList-class {edgeR} | R Documentation |
A simple list-based class for storing results of differential expression analysis for DGE data
Objects of this class contain the following list components:
ps : | list containing estimates of p parameter. |
r : | numeric vector of size parameter (1/phi ) where phi is negative binomial dispersion. |
pseudo : | numeric matrix with the pseudo-counts. |
M : | numeric scalar with the library size that pseudo counts are mapped to. |
exact : | numeric vector of exact p-values (unadjusted). |
This class inherits directly from class list
so any operation appropriate for lists will work on objects of this class.
deDGEList
objects also have a show
method.
Mark Robinson