probeset.stats {exonmap} | R Documentation |
Each column represent the uniqueness of a probeset's hits to the genome, exons or introns. Each value in a column is 0 or a positive integer. If the value is zero then one or more probes within the probeset do not match the genome (or exons, or introns). Values of 1 correspond to probesets where each probe matches once and only once; values > 1 correspond to probesets where 1 or more probes hit multiple times. For more details see the package vignette.
probeset.stats(probesets)
probesets |
a probeset list |
A data frame with gene, exon and intron matches for each probeset.
Crispin. J. Miller, Michal Okoniewski
http://bioinformatics.picr.man.ac.uk/
select.probewise
exclude.probewise
if(interactive()) { xmapConnect() probesets <- gene.to.probeset("ENSG00000005893"); probeset.stats(probesets) }