Qualitiy control for flow cytometry


[Package List] [Top]

Documentation for package ‘flowQ’ version 1.2.0

User Guides and Package Vignettes

Read overview or browse directory.

Help Pages

flowQ-package Quality control for flow cytometry
aggregatorList Class "aggregatorList"
aggregatorList-class Class "aggregatorList"
binaryAggregator Class "binaryAggregator"
binaryAggregator-class Class "binaryAggregator"
discreteAggregator Class "discreteAggregator"
discreteAggregator-class Class "discreteAggregator"
evaluateProcess Evaluate QA processes
factorAggregator Class "factorAggregator"
factorAggregator-class Class "factorAggregator"
flowQ Quality control for flow cytometry
initialize,aggregatorList-method Class "aggregatorList"
initialize,qaGraph-method Class "qaGraph"
initialize,qaGraphList-method Class "qaGraphList"
initialize,qaProcess-method Abstraction of the results of a QA process
initialize,qaProcessFrame-method Class "qaProcessFrame"
names,qaGraph-method Class "qaGraph"
numericAggregator Class "numericAggregator"
numericAggregator-class Class "numericAggregator"
outlier-class Virtual Class "outlier"
outlierResult-class Class "outlierResult"
outliers ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
outliers,flowSet-method ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
outliers-methods ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
qaAggregator Abstraction of the possible outcomes of a QA process
qaAggregator-class Abstraction of the possible outcomes of a QA process
qaGraph Class "qaGraph"
qaGraph-class Class "qaGraph"
qaGraphList Class "qaGraphList"
qaGraphList-class Class "qaGraphList"
qaProcess Abstraction of the results of a QA process
qaProcess-class Abstraction of the results of a QA process
qaProcess.cellnumber Create QA process of type 'cellnumber'
qaProcess.marginevents Create QA process of type 'marginevents'
qaProcess.timeflow Create QA process of type 'timeflow'
qaProcess.timeline Create QA process of type 'timeline'
qaProcessFrame Class "qaProcessFrame"
qaProcessFrame-class Class "qaProcessFrame"
qaProcessSummary Class "qaProcessSummary"
qaProcessSummary-class Class "qaProcessSummary"
qaReport Create HTML report using one or several QA process function(s)
rangeAggregator Class "rangeAggregator"
rangeAggregator-class Class "rangeAggregator"
show,aggregatorList-method Class "aggregatorList"
show,binaryAggregator-method Class "binaryAggregator"
show,discreteAggregator-method Class "discreteAggregator"
show,factorAggregator-method Class "factorAggregator"
show,numericAggregator-method Class "numericAggregator"
show,qaGraph-method Class "qaGraph"
show,qaGraphList-method Class "qaGraphList"
show,qaProcess-method Abstraction of the results of a QA process
show,qaProcessFrame-method Class "qaProcessFrame"
show,qaProcessSummary-method Class "qaProcessSummary"
show,rangeAggregator-method Class "rangeAggregator"
show,stringAggregator-method Class "stringAggregator"
stringAggregator Class "stringAggregator"
stringAggregator-class Class "stringAggregator"
validProcess Validate a QAProcess object
writeLines,binaryAggregator,file,missing-method Class "binaryAggregator"
writeLines,data.frame,file,missing-method Create HTML report for (lists of) qaProcess objects
writeLines,discreteAggregator,file,missing-method Class "discreteAggregator"
writeLines,factorAggregator,file,missing-method Class "factorAggregator"
writeLines,numericAggregator,file,missing-method Class "numericAggregator"
writeLines,qaProcessSummary,file,missing-method Class "qaProcessSummary"
writeLines,rangeAggregator,file,missing-method Class "rangeAggregator"
writeLines,stringAggregator,file,missing-method Class "stringAggregator"
writeQAReport Create HTML report for (lists of) qaProcess objects