qaProcess.timeflow {flowQ} | R Documentation |
This function takes a flowSet
as input and
creates all necessary output for a 'timeflow' type QA
process. Objects created by this function can be laid out as HTML
using writeQAReport
.
qaProcess.timeflow(set, outdir, cutoff=2, name="time flow", sum.dimensions=c(7,7), det.dimensions=c(7,7), ...)
set |
A flowSet |
outdir |
The directory to which the graphical output is to be saved. If multiple QA processes are to be combined, make sure to use the same directory every time. |
cutoff |
The threshold at which the QA process is considered to
be failed. An absolute value in the timeline deviation score as
computed by the timeLinePlot function |
name |
The name of the process used for the headings in the HTML output |
sum.dimensions, det.dimensions |
The pdf dimensions used for the summary and the detailed plots. |
... |
Further arguments. |
QA processes of type 'timeflow' detect disturbances in the flow of cells over time.
For more details on how to layout qaProcess
objects to
HTML, see writeQAReport
and qaReport
.
An object of class qaProcess
.
Florian Hahne
writeQAReport
, qaReport
,
qaProcess
, qaProcess.marginevents
,
qaProcess.timeline
, qaProcess.cellnumber
## Not run: data(GvHD) dest <- tempdir() qp <- qaProcess.timeflow(GvHD, outdir=dest, cutoff=1) qp ## End(Not run)