Broadcast data between R and other bioinformatics programs


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Documentation for package ‘gaggle’ version 1.10.0

User Guides and Package Vignettes

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Help Pages

broadcast Broadcast Data to the Gaggle
connectToGaggle Connect to the Gaggle Boss
disconnectFromGaggle Disconnect from the Gaggle Boss
gaggleInit Initialize the R Goose, registering with the Gaggle
geese What Geese (Programs) are Currently Running in the Gaggle?
getCluster Create an R variable from Most Recently Broadcast Cluster
getMatrix Create an R matrix variable from Most Recently Broadcast Matrix
getNameList Create an R variable from Most Recently Broadcast NameList
getNetwork Create an R network variable from a Broadcast Network
getSpecies Specify the Species To Which Subsequent Data Belongs
getTargetGoose Which Goose will Receive Broadcasts?
getTuple Create an R variable from Most Recently Broadcast Tuple
hideGoose Hide a Goose from View
setSpecies Specify the Species To Which Subsequent Data Belongs
setTargetGoose Specify Which Goose will Receive Broadcasts
showGoose Show a Goose On the Screen
testGagglePackage Run unit tests for the Gaggle Package