plotHousekeepingGene {lumi} | R Documentation |
Plot the housekeeping gene expression profile
plotHousekeepingGene(controlData, lib = NULL, slideIndex = NULL, addLegend = TRUE, logMode = TRUE, ...)
controlData |
a LumiBatch object including control data or a control data data.frame |
lib |
the annotation library (for retrieving the gene name) |
slideIndex |
the slide index or ID corresponding to each sample |
addLegend |
whether add legend or not |
logMode |
whether show the data in log2 scale |
... |
other parameters used by default matplot function |
plot the picture and return TRUE if everything is OK
Pan Du
addControlData2lumi
, plotControlData
controlFile <- system.file('doc', 'Control_Probe_Profile.txt', package='lumi') controlData <- getControlData(controlFile) plotHousekeepingGene(controlData)