getSamplesFromDB {maDB}R Documentation

Lists all or only specified samples from the database.

Description

getSamplesFromDB This function lists all samples that are stored into a database with the publishToDB function, or lists all samples that match the pattern submitted.

Usage

getSamplesFromDB(Con,table.name="samples",pattern)

Arguments

Con The connection to the database (returned by the dbConnect function of the RdbiPgSQL package).
table.name The name of the table that contains the information about the samples.
pattern A pattern that can be used to search for in all columns of the table.

Details

This function returns a table (data.frame/matrix) with all samples stored in the database, or searches for those entries, that correspond to the submitted pattern.

Author(s)

Johannes Rainer

See Also

publishToDB MadbSet-class


[Package maDB version 1.14.1 Index]