activeNetScoreHTML {maigesPack} | R Documentation |
This function takes an object of class maigesActNet
,
that is generated using the function activeNet
to do
functional classification of gene groups, and save an HTML file with
global score for genes separated by gene groups (modules).
activeNetScoreHTML(mod=NULL, dir="./", fileSave="scores")
mod |
object of class maigesActNet , resulted from
functional classification of gene networks. |
dir |
character string giving the folder to save the file. |
fileSave |
string giving the file name. You don't need to put the extension 'html', it will be put automatically. |
This function generates an HTML file and don't return any R value or object.
Gustavo H. Esteves <gesteves@vision.ime.usp.br>
## Loading the dataset data(gastro) ## Doing functional classification of gene networks for sample Label ## given by 'Tissue' gastro.net = activeNet(gastro.summ, sLabelID="Tissue") activeNetScoreHTML(gastro.net)