syn.data {minet} | R Documentation |
Dataset containing 100 samples and 50 genes generated by the publicly available SynTReN generator
using a yeast source network - see syn.net
data(syn.data)
syn.data
is a data frame containing 100 rows and 50 columns.
Each row contains a microarray experiment and each column contains a gene.
Tim Van den Bulcke, Koenraad Van Leemput, Bart Naudts, Piet van Remortel, Hongwu Ma, Alain Verschoren, Bart De Moor, and Kathleen Marchal. Syntren : a generator of synthetic gene expression dataset for design and analysis of structure learning algorithms. BMC Bioinformatics, 2006.
data(syn.data) data(syn.net) syn.data <- discretize(syn.data) mim <- build.mim(syn.data) infered.net <- mrnet(mim) max(fscores(validate( infered.net, syn.net )))