etDelta {occugene} | R Documentation |
Estimates the number of new knockouts in next d clones.
etDelta(d,anno,clone)
d |
number of new clones |
anno |
2-column matrix of annotation |
clone |
vector |
Estimates the number of new ORF knockouts in the next d clones using the method outlined by Efron and Thisted.
expected |
Expected value |
variance |
Variance |
Oliver Will owill4@yahoo.com
See the book chapter O. Will (**) in ** and also Efron, B. and Thisted, R. (1976) Estimating the number of unseen species: How many words did Shakespere know? Biometrika. 63, 435-447.
data(sampleAnnotation) data(sampleInsertions) a.data <- sampleAnnotation experiment <- sampleInsertions orf <- cbind(a.data$first,a.data$last) clone <- experiment$position etDelta(10,orf,clone)