fFit {occugene} | R Documentation |
Parameterizes the cumulative occupancy distribution.
fFit(anno,clone,TR=TRUE,b0=0,b1=0,b2=.0)
anno |
2-column matrix of annotation |
clone |
vector |
TR |
Report a trace |
b0 |
Starting value b0 |
b1 |
Starting value b1 |
b2 |
Starting value b2 |
Fits various parametric functions to the occupancy distribution for a multinomial. Using the starting values of b0=0, b1=0, and b2=0 forces the function to find starting values for you.
Returns a object.
Oliver Will owill4@yahoo.com
See the book chapter O. Will (**) in **
data(sampleAnnotation) data(sampleInsertions) anno <- cbind(sampleAnnotation$first,sampleAnnotation$last) clone <- sampleInsertions$position TR <- TRUE fm <- fFit(anno,clone,TR)