platformDesign-class {oligo}R Documentation

Class "platformDesign"

Description

Container for chip information, this is environment-based and is being replaced by DBPDInfo.

Objects from the Class

Objects can be created by calls of the form new("platformDesign", ...).

Slots

featureInfo:
Object of class "environment" containing vectors describing the array.
featureTypeDescription:
Object of class "list"
type:
Object of class "character" describing the type of the array ("expression", "exon", "SNP", "tiling"
nrow:
Object of class "numeric" providing the number of rows.
ncol:
Object of class "numeric" providing the number of columns
nwells:
Object of class "numeric" providing the number of wells - NimbleGen specific.
lookup:
Object of class "data.frame": a lookup table for complex designs by NimbleGen.
indexes:
Object of class "list" ~~
platforms:
Object of class "character" ~~
manufacturer:
Object of class "character" ~~
genomebuild:
Object of class "character" ~~

Extends

Class "PDInfo", directly.

Methods

No methods defined with class "platformDesign" in the signature.

Examples

##---- Should be DIRECTLY executable !! ----

[Package oligo version 1.6.0 Index]