extractAffyids {oneChannelGUI} | R Documentation |
It is possible to identify the affy ids associated to a specific GO term using the extractAffyids function.
extractAffyids()
The function asks to the user to select a file containing probe set ids separated by carriage return. The file should contain only one column and no header. The user is also asked to select a specific GO term. The probe sets associated to the specific GO term will be annotated ans saved in a HTML file.
For the annotation the annotation library associated to the raw data loaded in the affylmGUI environment is used.
Raffaele A. Calogero
GOenrichment, plotGO