NgsTilingPDInfoPkgSeed-class {pdInfoBuilder}R Documentation

Class "NgsTilingPDInfoPkgSeed"

Description

PDInfo package Seed for NimbleGen Tiling arrays

Objects from the Class

Objects can be created by calls of the form new("NgsTilingPDInfoPkgSeed", ndfFile, posFile, pairFile, ...).

Slots

ndfFile:
NDF (NimbleGen Design) file
posFile:
POS (Positions) file
pairFile:
XYS File - used as template
chipName:
Design identifier
manufacturer:
Manufacturer: Affymetrix/NimbleGen
genomebuild:
Genome Build
pdInfoObjectName:
object name
geometry:
array dimensions
name:
name
version:
Version
license:
License
author:
Author
email:
Author's email
url:
website
biocViews:
biocViews

Extends

Class "PDInfoPkgSeed", directly. Class "PkgSeed", by class "PDInfoPkgSeed", distance 2.

Methods

chipName
signature(object = "NgsPDInfoPkgSeed"): ...
initialize
signature(.Object = "NgsPDInfoPkgSeed"): ...

Examples

showClass("NgsTilingPDInfoPkgSeed")

[Package pdInfoBuilder version 1.6.0 Index]