createSummaryTables {ppiStats} | R Documentation |
This function takes a list of directed graph objects and creates a summary table based on the directed connectivity.
createSummaryTables(dataGraphs)
dataGraphs |
A named list of directed graphNELs |
A dataframe with the rows indexed by the names of each directed graphNEL and the columns indexed by viable baits (VB), viable prey (VP), viable bait/prey (VBP), the ratio of viable bait/prey by viable baits (VBP/VB), the ratio of viable prey by viable baits (VP/VB), the total number of directed interactions (TI), and the ratio of total intractions by viable baits (TI/VB).
T Chiang
graphs = lapply(bpExperimentNames, function(x) get(x)) names(graphs) = bpExperimentNames createSummaryTables(graphs)