Compartment-class {rsbml} | R Documentation |
A bounded space that contains Species
.
Objects can be created by calls of the form new("Compartment", ...)
.
id
:"character"
uniquely identifying this component. name
:"character"
naming this component. spatialDimensions
:"integer"
indicating
the number of dimensions (0, 1, 2, or 3)size
:"numeric"
indicating the size in
the given units. units
:"character"
indicating the units
(built-in or the id of a UnitDefinition
). outside
:"character"
identifying the
compartment containing this compartment.constant
:"logical"
indicating whether
the size changes during simulation.metaId
:"character"
that is an XML ID
"described" by an RDF resource. This links an SBML element to an RDF
resource. RDF may appear anywhere in an SBML element,
but is usually placed inside the annotation
element.notes
:"character"
containing user-readable XHTML notes about an element. annotation
:"character"
containing
additional machine-readable information about an element, usually as RDF,
such as BioPAX. This is where application-specific data belongs.cvTerms
:"list"
containing
instances of CVTerm
associated with this
element.sboTerm
:"integer"
identifying
a term in the Systems Biology Ontology (SBO).
Class "SBase"
, directly.
signature(object = "Compartment")
: gets the id
slot signature(object = "Compartment")
: sets the id
slot signature(object = "Compartment")
: gets the name
slot signature(object = "Compartment")
: sets the name
slot signature(object = "Compartment")
: gets the constant
slot signature(object = "Compartment")
: sets the constant
slot signature(object = "Compartment")
: gets the outside
slot signature(object = "Compartment")
: sets the outside
slot signature(object = "Compartment")
: gets the size
slot signature(object = "Compartment")
: sets the size
slot signature(object = "Compartment")
: gets the constant
slot signature(object = "Compartment")
: sets the constant
slot signature(object = "Compartment")
: gets the spatialDimensions
slot signature(object = "Compartment")
: sets the spatialDimensions
slot Michael Lawrence