Reaction-class {rsbml} | R Documentation |
Any transformation, transportation or binding process that changes the
quantity of one or more Species
.
Objects can be created by calls of the form new("Reaction", ...)
.
id
:"character"
uniquely identifying this component. name
:"character"
naming this component. reactants
:"list"
containing
SpeciesReference
s specifying the
Species
that are reactants for this reaction.products
:"list"
containing
SpeciesReference
s specifying the
Species
that are products for this reaction. modifiers
:"list"
containing
ModifierSpeciesReference
s specifying the
Species
that are modifiers for this reaction. kineticLaw
:"KineticLaw"
that dynamically
defines the rate of the reaction.reversible
:"logical"
indicating whether
the direction of this reaction is reversible.fast
:"logical"
indicating whether
this reaction should be considered instantaneous relative to non-fast reactions.metaId
:"character"
that is an XML ID
"described" by an RDF resource. This links an SBML element to an RDF
resource. RDF may appear anywhere in an SBML element,
but is usually placed inside the annotation
element.notes
:"character"
containing user-readable XHTML notes about an element. annotation
:"character"
containing
additional machine-readable information about an element, usually as RDF,
such as BioPAX. This is where application-specific data belongs.cvTerms
:"list"
containing
instances of CVTerm
associated with this
element.sboTerm
:"integer"
identifying
a term in the Systems Biology Ontology (SBO).
Class "SBase"
, directly.
signature(object = "Reaction")
: gets the id
slot signature(object = "Reaction")
: sets the id
slot signature(object = "Reaction")
: gets the name
slot signature(object = "Reaction")
: sets the name
slot signature(object = "Reaction")
: gets the fast
slot signature(object = "Reaction")
: sets the fast
slot signature(object = "Reaction")
: gets the kineticLaw
slot signature(object = "Reaction")
: sets the kineticLaw
slot signature(object = "Reaction")
: gets the modifiers
slot signature(object = "Reaction")
: sets the modifiers
slot signature(object = "Reaction")
: gets the products
slot signature(object = "Reaction")
: sets the products
slot signature(object = "Reaction")
: gets the reactants
slot signature(object = "Reaction")
: sets the reactants
slot signature(object = "Reaction")
: gets the reversible
slot signature(object = "Reaction")
: sets the reversible
slot Michael Lawrence