genomeSequence-methods {rtracklayer}R Documentation

Retrieving a genome sequence

Description

Methods for retrieving the sequence of a genomeSegment from an object.

Methods

The following methods are defined by rtracklayer for genomeSequence(object, segment = genomeSegment(object), ...).

object = "ucscSession"
genomeSequence(object, segment = genomeSegment(object), track = "Assembly"): Gets the sequence in segment and track from the session.
object = "argoSession"
genomeSequence(object, segment): Gets the sequence in segment from the session.

See Also

laySequence for storing sequences.


[Package rtracklayer version 1.2.2 Index]