Retrieval from the DAVID bioinformatics data resource into R


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Documentation for package ‘DAVIDQuery’ version 1.4.0

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DAVIDQuery-package Retrieval from DAVID bioinformatics data resource.
AffyProbesetList Retrieve Affy probeset IDs from DAVID.
affyToUniprot Obtain Affymetrix probeset IDs for given Uniprot IDs.
bracketedStrings Extract bracketed substrings.
catalogDAVIDResultsByTool Create a catalog of types of DAVID results.
DAVIDAnnotChoices Choices for the DAVID query parameters
DAVIDQuery DAVIDQuery
DAVIDQueryLoop Access DAVID multiple times.
DAVIDToolChoices Choices for the DAVID query parameters
DAVIDTypeChoices Choices for the DAVID query parameters
DAVIDURLBase Base URL for the DAVID database.
formatAnnotationReport Format the character table returned by DAVID.
formatDAVIDResult Format the character table returned by DAVID.
formatGene2Gene Format the character table returned by DAVID.
formatGeneReport Format the character table returned by DAVID.
formatGeneReportFull Format the character table returned by DAVID.
formatList Format the character table returned by DAVID.
idExampleList idExampleList
testGene2Gene Test DAVID gene2gene tool
uniprotToAffy Obtain Affymetrix probeset IDs for given Uniprot IDs.