dualKS-package | Dual KS Discriminant Analysis and Classification |
class:DKSClassifier | Class to contain gene set signatures. |
class:DKSGeneScores | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
class:DKSGeneSet | Class to contain gene signatures. |
class:DKSPredicted | Class to contain classification results from dksClassify |
dks | A demonstration data set for package dualKS. |
DKSClassifier | Class to contain gene set signatures. |
DKSClassifier-class | Class to contain gene set signatures. |
dksClassify | Predict classes for gene expression sets. |
dksCustomClass | Create a classification object from predefined gene signature. |
DKSGeneScores | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
DKSGeneScores-class | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
DKSGeneSet | Class to contain gene signatures. |
DKSGeneSet-class | Class to contain gene signatures. |
dksPerm | Estimate significance of signature scores. |
DKSPredicted | Class to contain classification results from dksClassify |
DKSPredicted-class | Class to contain classification results from dksClassify |
dksSelectGenes | Extract gene signatures from a DKSGeneScores object. |
dksTrain | Perform Dual KS Discriminant Analysis |
dksWeights | Calculate gene weights based on average expression. |
dualKS | Dual KS Discriminant Analysis and Classification |
eset | A demonstration data set for package dualKS. |
KS | Calculate Kolmogorov Smirnov rank sum scores. |
plot,DKSPredicted,missing-method | Class to contain classification results from dksClassify |
plot,DKSPredicted-method | Class to contain classification results from dksClassify |
pv.f | A demonstration data set for package dualKS. |
pvr.f | A demonstration data set for package dualKS. |
show,DKSPredicted-method | Class to contain classification results from dksClassify |
summary,DKSPredicted-method | Class to contain classification results from dksClassify |