qpgraph-package |
The q-order partial correlation graph learning software, qpgraph. |
EcoliOxygen |
Preprocessed microarray oxygen deprivation data and filtered RegulonDB data |
filtered.regulon6.1 |
Preprocessed microarray oxygen deprivation data and filtered RegulonDB data |
gds680.eset |
Preprocessed microarray oxygen deprivation data and filtered RegulonDB data |
qpAnyGraph |
A graph |
qpAvgNrr |
Average non-rejection rate estimation |
qpAvgNrr,data.frame-method |
Average non-rejection rate estimation |
qpAvgNrr,ExpressionSet-method |
Average non-rejection rate estimation |
qpAvgNrr,matrix-method |
Average non-rejection rate estimation |
qpCItest |
Conditional independence test |
qpCItest,data.frame-method |
Conditional independence test |
qpCItest,ExpressionSet-method |
Conditional independence test |
qpCItest,matrix-method |
Conditional independence test |
qpClique |
Complexity of the resulting qp-graphs |
qpCliqueNumber |
Clique number |
qpDscale |
Scale a matrix by its diagonal |
qpEdgeNrr |
Non-rejection rate estimation for a pair of variables |
qpEdgeNrr,data.frame-method |
Non-rejection rate estimation for a pair of variables |
qpEdgeNrr,ExpressionSet-method |
Non-rejection rate estimation for a pair of variables |
qpEdgeNrr,matrix-method |
Non-rejection rate estimation for a pair of variables |
qpFunctionalCoherence |
Functional coherence estimation |
qpGetCliques |
Clique list |
qpGraph |
The qp-graph |
qpgraph |
The q-order partial correlation graph learning software, qpgraph. |
qpGraphDensity |
Densities of resulting qp-graphs |
qpHist |
Histograms of non-rejection rates |
qpI2K |
Random concentration matrix |
qpImportNrr |
Import non-rejection rates |
qpIPF |
Iterative proportional fitting algorithm |
qpK2R |
Partial correlation coefficients |
qpNrr |
Non-rejection rate estimation |
qpNrr,data.frame-method |
Non-rejection rate estimation |
qpNrr,ExpressionSet-method |
Non-rejection rate estimation |
qpNrr,matrix-method |
Non-rejection rate estimation |
qpPAC |
Estimation of partial correlation coefficients |
qpPAC,data.frame-method |
Estimation of partial correlation coefficients |
qpPAC,ExpressionSet-method |
Estimation of partial correlation coefficients |
qpPAC,matrix-method |
Estimation of partial correlation coefficients |
qpPCC |
Estimation of Pearson correlation coefficients |
qpPCC,data.frame-method |
Estimation of Pearson correlation coefficients |
qpPCC,ExpressionSet-method |
Estimation of Pearson correlation coefficients |
qpPCC,matrix-method |
Estimation of Pearson correlation coefficients |
qpPrecisionRecall |
Calculation of precision-recall curves |
qpPRscoreThreshold |
Calculation of scores thresholds attaining nominal precision or recall levels |
qpRndGraph |
Random undirected graphs with maximum connectivity degree |
qpSampleMvnorm |
Sample multivariate normal observations |